Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_18602049_18631107_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18602049 - 18631107

Intron Length:

29059

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACT|GTAAGTACA

5'SS Class:

major

3'SS Sequence:

TCTGTTTTGTTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTAAC

U12 Branch Point Sequence:

TAAAAATTAACT

Flanking Amino Acid:

RNLQARHNFYLAAPDLLDPK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.9

0.61

1.1

36.3

Major BPS

73.1

0.57

0.9

73.7

27.1

Major PPT

75.6

0.58

76.9

37.3

Minor 5ss

38.9

-1.2

2.7

53.8

42.8

Minor BPS

55.2

0.24

1.8

74.02

41.4

Associated Gene:

Gene:

KCNK2

Ensembl Gene ID:

ENSAPLG00000009845

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021005

18576304 - 18704220

127917

ENSAPLT00000041429

18575758 - 18704220

128463

ENSAPLT00000037951

18576966 - 18704220

127255