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Intron Name: Anas_platyrhynchos_platyrhynchos_3_18814616_18814961_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18814616 - 18814961

Intron Length:

346

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGTCAC

5'SS Class:

strong_major

3'SS Sequence:

TTTCTTTTGGAAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCTT

U12 Branch Point Sequence:

TTCTTTTGGAAG

Flanking Amino Acid:

QPNRLRESNSSLQLQHHETI

Intron Amino Acid Position:

577

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.7

0.82

72.3

39.5

Major BPS

39.5

-0.6

4.3

85.7

34.9

Major PPT

74.1

0.54

1.1

78.8

33.4

Minor 5ss

33.1

-1.9

3.2

43.3

44.4

Minor BPS

47.8

-0.3

1.6

55.24

40.4

Associated Gene:

Gene:

KCTD3

Ensembl Gene ID:

ENSAPLG00000009311

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020686

18790933 - 18915318

124386

ENSAPLT00000009725

18790933 - 18815544

24612