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Intron Name: Anas_platyrhynchos_platyrhynchos_3_18884393_18884918_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18884393 - 18884918

Intron Length:

526

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTAAGGAGA

5'SS Class:

strong_major

3'SS Sequence:

GTGATATTAATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTCAT

U12 Branch Point Sequence:

CTGTCATAAAAT

Flanking Amino Acid:

SGQTLQSAPHGVWPKPHHII

Intron Amino Acid Position:

3670

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.8

0.73

42.1

Major BPS

87.6

0.93

0.9

89.3

Major PPT

0.25

55.5

43.7

Minor 5ss

32.1

-2

3.1

40.4

45.5

Minor BPS

49.3

0.02

2.1

70.17

46.3

Associated Gene:

Gene:

USH2A

Ensembl Gene ID:

ENSAPLG00000008642

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009024

18817109 - 19208326

391218