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Intron Name: Anas_platyrhynchos_platyrhynchos_3_18905190_18915297_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18905190 - 18915297

Intron Length:

10108

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACATGTT

5'SS Class:

major

3'SS Sequence:

TAACTACTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

ATTTTTTTAACT

Flanking Amino Acid:

GEECYHPELKVCCNGILHDN

Intron Amino Acid Position:

3181

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.3

0.69

78.8

35.5

Major BPS

96.5

1.15

0.6

34.2

Major PPT

70.8

0.47

0.9

67.4

38.7

Minor 5ss

36.9

-1.5

3.7

57.9

46.7

Minor BPS

84.4

1.16

0.9

93.73

26.7

Associated Gene:

Gene:

USH2A

Ensembl Gene ID:

ENSAPLG00000008642

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009024

18817109 - 19208326

391218