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Intron Name: Anas_platyrhynchos_platyrhynchos_3_19050704_19055359_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

19050704 - 19055359

Intron Length:

4656

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCA|GTAAGTTTA

5'SS Class:

major

3'SS Sequence:

TTAAAATCTATAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TTTTTCAAAATC

Flanking Amino Acid:

YNKDGTDYLAIELKSGILNV

Intron Amino Acid Position:

1761

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.8

0.68

78.2

32.4

Major BPS

90.4

0.7

90.2

19.3

Major PPT

66.6

0.37

59.2

41.5

Minor 5ss

-0.4

2.8

63.8

41.6

Minor BPS

56.9

0.2

1.9

74.53

36.5

Associated Gene:

Gene:

USH2A

Ensembl Gene ID:

ENSAPLG00000008642

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009024

18817109 - 19208326

391218