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Intron Name: Anas_platyrhynchos_platyrhynchos_3_19055491_19055937_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

19055491 - 19055937

Intron Length:

447

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATATGC

5'SS Class:

major

3'SS Sequence:

ACTTTCTTTCAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTGAT

U12 Branch Point Sequence:

ATTTGATTAACT

Flanking Amino Acid:

LSEGAHFLGKGFLELHSDVF

Intron Amino Acid Position:

1717

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.8

0.7

68.8

37.2

Major BPS

87.6

0.93

0.8

77.4

37.3

Major PPT

0.54

71.9

37.8

Minor 5ss

38.4

-1.3

51.4

45.1

Minor BPS

66.4

0.59

87.83

37.1

Associated Gene:

Gene:

USH2A

Ensembl Gene ID:

ENSAPLG00000008642

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009024

18817109 - 19208326

391218