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Intron Name: Anas_platyrhynchos_platyrhynchos_3_19057772_19058177_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

19057772 - 19058177

Intron Length:

406

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATCAAT

5'SS Class:

strong_major

3'SS Sequence:

CTATTTTGTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATAAAC

U12 Branch Point Sequence:

GAATCTTGACCT

Flanking Amino Acid:

GNITVDGQYTGSSLAASGST

Intron Amino Acid Position:

1624

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.8

0.75

79.8

35.1

Major BPS

64.6

0.36

71.3

30.4

Major PPT

77.1

0.61

0.9

77.1

36.9

Minor 5ss

41.1

-1

2.9

57.5

46.8

Minor BPS

51.4

0.12

1.7

67.92

42.4

Associated Gene:

Gene:

USH2A

Ensembl Gene ID:

ENSAPLG00000008642

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009024

18817109 - 19208326

391218