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Intron Name: Anas_platyrhynchos_platyrhynchos_3_1941393_2110277_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

1941393 - 2110277

Intron Length:

168885

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATGAAAT

5'SS Class:

strong_major

3'SS Sequence:

TTGTTTCTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTATTAT

U12 Branch Point Sequence:

TGTTTCTTACAG

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.8

0.84

0.9

82.4

29.8

Major BPS

72.4

0.56

1.1

63.7

42.3

Major PPT

89.2

0.88

0.7

84.2

30.9

Minor 5ss

41.2

-1

2.9

57.1

47.2

Minor BPS

57.3

0.09

1.8

64.96

42.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012517

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013047

1909148 - 2191866

282719