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Intron Name: Anas_platyrhynchos_platyrhynchos_3_19893546_19904425_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

19893546 - 19904425

Intron Length:

10880

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATAAAAC

5'SS Class:

major

3'SS Sequence:

TTATTTCCTGTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

ATATACTAAACA

Flanking Amino Acid:

SRRYFRKIVKIQKRWRGYYV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.9

0.59

70.1

33.8

Major BPS

96.5

1.15

0.6

34.2

Major PPT

82.4

0.73

0.7

78.5

30.1

Minor 5ss

39.2

-1.2

2.9

51.4

45.5

Minor BPS

59.9

0.31

1.9

71.97

39.5

Associated Gene:

Gene:

SPATA17

Ensembl Gene ID:

ENSAPLG00000005733

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046278

19885504 - 19980015

94512