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Intron Name: Anas_platyrhynchos_platyrhynchos_3_20057067_20059498_R

Intron Information:

Intron Rank:

145804

Intron Class:

major

Intron Phase:

Intron Coordinates:

20057067 - 20059498

Intron Length:

2432

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTTAGTACT

5'SS Class:

major

3'SS Sequence:

TTTTTTTTTTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTAAA

U12 Branch Point Sequence:

AGGAATTAAACT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.5

0.6

1.1

79.3

33.9

Major BPS

73.8

0.59

0.9

26.8

Major PPT

95.8

1.03

0.5

96.6

11.7

Minor 5ss

36.4

-1.5

2.6

46.2

Minor BPS

46.5

-0.1

1.8

60.74

42.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025830

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024460

20056733 - 20060387

3655

ENSAPLT00000044223

20056733 - 20062056

5324