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Intron Name: Anas_platyrhynchos_platyrhynchos_3_20196946_20199079_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

20196946 - 20199079

Intron Length:

2134

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTACTGAGG

5'SS Class:

weak_major

3'SS Sequence:

TTTTCTGCCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TTCTTTTTCATT

Flanking Amino Acid:

AATRGPEADSGSELSSGLPD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

59.3

0.22

1.2

48.6

47.1

Major BPS

100

1.24

0.5

100

Major PPT

76.5

0.6

0.8

36.5

Minor 5ss

31.1

-2.2

3.3

39.8

45.9

Minor BPS

60.5

0.41

1.7

78.3

39.3

Associated Gene:

Gene:

RRP15

Ensembl Gene ID:

ENSAPLG00000005787

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036870

20196900 - 20217190

20291

ENSAPLT00000005988

20196900 - 20208235

11336