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Intron Name: Anas_platyrhynchos_platyrhynchos_3_20199355_20201126_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20199355 - 20201126

Intron Length:

1772

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGAAAA

5'SS Class:

strong_major

3'SS Sequence:

ATTTATAATGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATAAT

U12 Branch Point Sequence:

ATATTTATAATG

Flanking Amino Acid:

KQERLEKRRKLDKKREWEMM

Intron Amino Acid Position:

108

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.6

0.91

0.8

82.1

24.6

Major BPS

87.8

0.94

0.9

86.6

28.1

Major PPT

73.9

0.54

67.9

41.7

Minor 5ss

27.3

-2.6

2.7

30.6

42.8

Minor BPS

52.9

-0

1.6

58.92

37.1

Associated Gene:

Gene:

RRP15

Ensembl Gene ID:

ENSAPLG00000005787

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036870

20196900 - 20217190

20291

ENSAPLT00000018280

20198035 - 20217190

19156

ENSAPLT00000005988

20196900 - 20208235

11336