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Intron Name: Anas_platyrhynchos_platyrhynchos_3_20317621_20318850_R

Intron Information:

Intron Rank:

129258

Intron Class:

major

Intron Phase:

Intron Coordinates:

20317621 - 20318850

Intron Length:

1230

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGTGGG

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCTTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTCAA

U12 Branch Point Sequence:

TGCTCTTCAAAG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

0.9

64.9

41.1

Major BPS

78.2

0.7

79.9

32.6

Major PPT

96.2

1.04

0.5

92.4

17.6

Minor 5ss

26.8

-2.7

28.2

38.6

Minor BPS

52.2

-0

1.7

57.62

43.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016746

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018691

20316349 - 20319117

2769