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Intron Name: Anas_platyrhynchos_platyrhynchos_3_20330738_20347339_F

Intron Information:

Intron Rank:

130976

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

20330738 - 20347339

Intron Length:

16602

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCT|GTACGCACT

5'SS Class:

weak_major

3'SS Sequence:

TTTTTTTTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTAAT

U12 Branch Point Sequence:

TTGTAGTGGATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

60.4

0.24

1.2

59.8

44.7

Major BPS

79.3

0.73

1.1

77.9

34.9

Major PPT

98.2

1.08

0.5

92.3

26.6

Minor 5ss

43.9

-0.7

3.1

68.4

42.1

Minor BPS

44.9

-0.3

2.3

68.4

42.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020352

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039433

20330244 - 20348362

18119