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Intron Name: Anas_platyrhynchos_platyrhynchos_3_20506588_20508577_F

Intron Information:

Intron Rank:

127203

Intron Class:

major

Intron Phase:

Intron Coordinates:

20506588 - 20508577

Intron Length:

1990

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTCAC

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTCCAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

ATTTTTTTATAT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.6

1.05

0.7

81.4

32.7

Major BPS

96.5

1.15

0.6

34.2

Major PPT

79.9

0.67

0.9

82.5

26.7

Minor 5ss

34.5

-1.8

2.9

43.8

43.9

Minor BPS

60.7

0.41

1.6

78.95

37.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018589

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025276

20506510 - 20514493

7984