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Intron Name: Anas_platyrhynchos_platyrhynchos_3_20627129_20645948_F

Intron Information:

Intron Rank:

148243

Intron Class:

major

Intron Phase:

Intron Coordinates:

20627129 - 20645948

Intron Length:

18820

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGC|GTAAGTATT

5'SS Class:

major

3'SS Sequence:

CTTTGAGTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTTAT

U12 Branch Point Sequence:

GTTTCTTTGAGT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.5

0.56

1.3

81.8

38.5

Major BPS

84.1

0.85

0.9

75.3

39.4

Major PPT

77.4

0.62

73.4

Minor 5ss

42.6

-0.8

2.9

41.5

Minor BPS

68.7

0.67

1.6

83.64

37.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029827

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028291

20611927 - 20655046

43120

ENSAPLT00000018843

20621608 - 20655046

33439

ENSAPLT00000039029

20621608 - 20656894

35287

ENSAPLT00000029431

20621608 - 20655064

33457

ENSAPLT00000029381

20627013 - 20647651

20639