Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_206638_207089_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

206638 - 207089

Intron Length:

452

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGTTTA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

ACTGTTCTAATT

Flanking Amino Acid:

SHLASYIRYKTCSLSTSSFK

Intron Amino Acid Position:

427

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.1

0.95

0.8

85.8

25.5

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

95.8

1.03

0.5

96.6

11.7

Minor 5ss

49.9

-0

2.4

66.7

44.7

Minor BPS

49.1

0.01

1.7

65.66

Associated Gene:

Gene:

MKKS

Ensembl Gene ID:

ENSAPLG00000009014

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038691

206200 - 211145

4946

ENSAPLT00000009380

206200 - 211145

4946