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Intron Name: Anas_platyrhynchos_platyrhynchos_3_20779748_20782345_R

Intron Information:

Intron Rank:

149470

Intron Class:

major

Intron Phase:

Intron Coordinates:

20779748 - 20782345

Intron Length:

2598

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGAGAA

5'SS Class:

strong_major

3'SS Sequence:

TCTTTTCTCCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTAGAA

U12 Branch Point Sequence:

GTGCCTGTGACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.1

0.87

0.8

76.5

26.8

Major BPS

57.4

0.18

1.1

54.9

40.8

Major PPT

83.1

0.74

0.7

77.1

31.6

Minor 5ss

24.3

-3

3.1

28.7

43.6

Minor BPS

47.9

-0.1

60.17

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027902

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042099

20779466 - 20787613

8148