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Intron Name: Anas_platyrhynchos_platyrhynchos_3_20782476_20786765_R

Intron Information:

Intron Rank:

149471

Intron Class:

major

Intron Phase:

Intron Coordinates:

20782476 - 20786765

Intron Length:

4290

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGAGTT

5'SS Class:

strong_major

3'SS Sequence:

TTTCTTTGAATAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGTTTAT

U12 Branch Point Sequence:

TTTTCTTTGAAT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.5

1.02

0.7

25.3

Major BPS

72.5

0.56

1.1

63.4

Major PPT

74.9

0.56

0.9

73.5

35.8

Minor 5ss

36.4

-1.5

3.6

55.7

48.5

Minor BPS

0.96

1.3

92.24

29.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027902

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042099

20779466 - 20787613

8148