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Intron Name: Anas_platyrhynchos_platyrhynchos_3_20787022_20787350_R

Intron Information:

Intron Rank:

149465

Intron Class:

major

Intron Phase:

Intron Coordinates:

20787022 - 20787350

Intron Length:

329

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGTCTT

5'SS Class:

strong_major

3'SS Sequence:

CTTCCTTTTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACCTAAC

U12 Branch Point Sequence:

CTGTACCTAACT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.4

0.93

0.8

83.5

Major BPS

63.2

0.33

63.6

30.5

Major PPT

89.5

0.89

0.6

87.8

22.3

Minor 5ss

40.3

-1.1

3.1

56.2

42.2

Minor BPS

58.7

0.35

1.9

77.73

44.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027902

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040343

20754959 - 20787613

32655

ENSAPLT00000025067

20718220 - 20787613

69394

ENSAPLT00000042099

20779466 - 20787613

8148