Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_20838679_20838805_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20838679 - 20838805

Intron Length:

127

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTACACTTC

5'SS Class:

major

3'SS Sequence:

TTTTTTCCTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TGATTTTTAATT

Flanking Amino Acid:

KTHIADFAPEVAWVTRSGKT

Intron Amino Acid Position:

1336

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.8

0.51

1.1

66.7

40.1

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

90.2

0.9

0.6

89.9

18.2

Minor 5ss

46.7

-0.3

3.2

67.5

43.9

Minor BPS

73.2

0.81

1.1

80.88

34.9

Associated Gene:

Gene:

EPRS1

Ensembl Gene ID:

ENSAPLG00000003240

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003386

20828718 - 20866428

37711

ENSAPLT00000034827

20828718 - 20866428

37711

ENSAPLT00000030320

20828947 - 20866428

37482

ENSAPLT00000029357

20828718 - 20866428

37711

ENSAPLT00000021002

20828718 - 20866428

37711