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Intron Name: Anas_platyrhynchos_platyrhynchos_3_20898340_20898956_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20898340 - 20898956

Intron Length:

617

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATTTTT

5'SS Class:

strong_major

3'SS Sequence:

GTTTTTCCAATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTTAATAATT

Flanking Amino Acid:

QLLSKEAVAKAGGSHDVLDY

Intron Amino Acid Position:

568

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.9

0.92

0.9

89.8

23.7

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

74.5

0.55

0.9

34.7

Minor 5ss

46.2

-0.4

2.8

67.4

43.6

Minor BPS

62.1

0.46

1.8

85.83

33.8

Associated Gene:

Gene:

IARS2

Ensembl Gene ID:

ENSAPLG00000004136

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004305

20881427 - 20911523

30097