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Intron Name: Anas_platyrhynchos_platyrhynchos_3_20899054_20904603_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20899054 - 20904603

Intron Length:

5550

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACGGTAT

5'SS Class:

strong_major

3'SS Sequence:

CGTATTTTTAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTGAA

U12 Branch Point Sequence:

GTATTTTTAAAG

Flanking Amino Acid:

SGTSWAHVLEGTEQRADTYL

Intron Amino Acid Position:

600

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.76

75.8

36.3

Major BPS

73.3

0.58

0.9

63.4

35.6

Major PPT

70.6

0.46

1.1

70.3

39.2

Minor 5ss

37.3

-1.4

3.6

55.1

49.1

Minor BPS

60.9

0.21

1.5

61.86

39.9

Associated Gene:

Gene:

IARS2

Ensembl Gene ID:

ENSAPLG00000004136

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004305

20881427 - 20911523

30097