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Intron Name: Anas_platyrhynchos_platyrhynchos_3_20913908_20915390_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20913908 - 20915390

Intron Length:

1483

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTTAA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTATATAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTTTTATAT

Flanking Amino Acid:

PTLCTWLKAMDPQELQNVEV

Intron Amino Acid Position:

1334

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.2

0.92

0.8

26.1

Major BPS

96.5

1.15

0.6

34.2

Major PPT

87.5

0.84

0.7

84.9

28.8

Minor 5ss

39.7

-1.2

2.8

45.9

43.7

Minor BPS

65.1

0.55

1.6

84.45

36.3

Associated Gene:

Gene:

RAB3GAP2

Ensembl Gene ID:

ENSAPLG00000004958

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025180

20913761 - 20947594

33834

ENSAPLT00000005191

20913761 - 20958232

44472