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Intron Name: Anas_platyrhynchos_platyrhynchos_3_20918540_20918785_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20918540 - 20918785

Intron Length:

246

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGTTTT

5'SS Class:

strong_major

3'SS Sequence:

ATTCCTCCGGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTTAT

U12 Branch Point Sequence:

TATTTTGTGACT

Flanking Amino Acid:

CSDLLQTLLEADVSSDEMQA

Intron Amino Acid Position:

1105

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

99.2

1.16

0.6

9.5

Major BPS

83.6

0.84

0.8

71.9

35.8

Major PPT

66.6

0.37

0.9

63.2

33.6

Minor 5ss

46.1

-0.4

2.8

66.9

44.4

Minor BPS

56.5

0.28

78.88

37.7

Associated Gene:

Gene:

RAB3GAP2

Ensembl Gene ID:

ENSAPLG00000004958

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025180

20913761 - 20947594

33834

ENSAPLT00000005191

20913761 - 20958232

44472