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Intron Name: Anas_platyrhynchos_platyrhynchos_3_20918861_20919331_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20918861 - 20919331

Intron Length:

471

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AGG|GCAAGTAAT

5'SS Class:

strong_major

3'SS Sequence:

CTACTGTTAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTCAA

U12 Branch Point Sequence:

CTACTGTTAACA

Flanking Amino Acid:

KAPKDRLCRRDVGMGDTAMT

Intron Amino Acid Position:

1080

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.7

0.82

1.1

82.3

37.3

Major BPS

74.2

0.6

0.9

75.7

Major PPT

70.2

0.46

65.1

39.8

Minor 5ss

26.6

-2.7

3.7

41.5

Minor BPS

52.1

0.06

2.1

65.02

41.4

Associated Gene:

Gene:

RAB3GAP2

Ensembl Gene ID:

ENSAPLG00000004958

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025180

20913761 - 20947594

33834

ENSAPLT00000005191

20913761 - 20958232

44472