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Intron Name: Anas_platyrhynchos_platyrhynchos_3_20919368_20920645_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20919368 - 20920645

Intron Length:

1278

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGAGCC

5'SS Class:

strong_major

3'SS Sequence:

TTTTTAAAAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

ATATTTTTAAAA

Flanking Amino Acid:

LSSATYLMDKVGKAPKDRLC

Intron Amino Acid Position:

1068

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.1

0.95

0.8

31.7

Major BPS

90.4

0.7

90.2

19.3

Major PPT

72.2

0.5

68.4

40.3

Minor 5ss

31.7

-2.1

3.3

42.5

44.5

Minor BPS

66.6

0.52

1.3

71.49

33.9

Associated Gene:

Gene:

RAB3GAP2

Ensembl Gene ID:

ENSAPLG00000004958

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025180

20913761 - 20947594

33834

ENSAPLT00000005191

20913761 - 20958232

44472