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Intron Name: Anas_platyrhynchos_platyrhynchos_3_20920717_20921433_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20920717 - 20921433

Intron Length:

717

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTATG

5'SS Class:

strong_major

3'SS Sequence:

GTGTTTGTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCACAA

U12 Branch Point Sequence:

GAGTTCACAAGT

Flanking Amino Acid:

RCIINAHVQHGIALMMWNTF

Intron Amino Acid Position:

1044

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.7

0.93

0.8

83.5

Major BPS

68.5

0.46

75.3

29.8

Major PPT

75.5

0.57

73.5

41.9

Minor 5ss

39.5

-1.2

2.8

48.4

41.7

Minor BPS

43.8

-0.3

58.89

43.8

Associated Gene:

Gene:

RAB3GAP2

Ensembl Gene ID:

ENSAPLG00000004958

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025180

20913761 - 20947594

33834

ENSAPLT00000005191

20913761 - 20958232

44472