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Intron Name: Anas_platyrhynchos_platyrhynchos_3_20926738_20928364_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20926738 - 20928364

Intron Length:

1627

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGAGCT

5'SS Class:

strong_major

3'SS Sequence:

CTTTTTACTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTCAT

U12 Branch Point Sequence:

TGTTCACTAATC

Flanking Amino Acid:

NMEDSKYVALGNFFFWKCLC

Intron Amino Acid Position:

734

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.6

0.98

0.8

81.6

Major BPS

91.2

1.02

0.7

91.7

20.2

Major PPT

87.6

0.85

0.7

85.8

27.1

Minor 5ss

33.1

-1.9

3.4

48.3

47.4

Minor BPS

0.23

1.9

73.52

36.8

Associated Gene:

Gene:

RAB3GAP2

Ensembl Gene ID:

ENSAPLG00000004958

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025180

20913761 - 20947594

33834

ENSAPLT00000005191

20913761 - 20958232

44472