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Intron Name: Anas_platyrhynchos_platyrhynchos_3_20929565_20931660_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20929565 - 20931660

Intron Length:

2096

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAGGTGGA

5'SS Class:

major

3'SS Sequence:

TTTTCTTCCTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTAAAAT

U12 Branch Point Sequence:

TACGAGTTAAAA

Flanking Amino Acid:

QTLMDNLEKQELECVDEGLL

Intron Amino Acid Position:

620

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.2

0.59

1.1

63.3

43.4

Major BPS

70.6

0.51

1.1

75.9

34.4

Major PPT

89.3

0.88

0.6

88.8

20.5

Minor 5ss

30.2

-2.3

3.3

31.3

42.9

Minor BPS

43.5

-0.4

2.3

54.55

43.7

Associated Gene:

Gene:

RAB3GAP2

Ensembl Gene ID:

ENSAPLG00000004958

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025180

20913761 - 20947594

33834

ENSAPLT00000005191

20913761 - 20958232

44472