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Intron Name: Anas_platyrhynchos_platyrhynchos_3_20933732_20935328_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20933732 - 20935328

Intron Length:

1597

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGATAG

5'SS Class:

strong_major

3'SS Sequence:

TTCTCTTACAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CACTAAT

U12 Branch Point Sequence:

CTTCTCTTACAA

Flanking Amino Acid:

TRGLAVRMWKGYRDAEVGWI

Intron Amino Acid Position:

420

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.6

0.77

0.9

70.3

36.4

Major BPS

74.4

0.61

0.9

73.6

28.6

Major PPT

68.4

0.41

70.7

32.8

Minor 5ss

43.4

-0.7

2.8

55.2

Minor BPS

52.9

0.09

1.7

65.41

Associated Gene:

Gene:

RAB3GAP2

Ensembl Gene ID:

ENSAPLG00000004958

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025180

20913761 - 20947594

33834

ENSAPLT00000005191

20913761 - 20958232

44472