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Intron Name: Anas_platyrhynchos_platyrhynchos_3_20936348_20936462_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20936348 - 20936462

Intron Length:

115

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATGAAA

5'SS Class:

strong_major

3'SS Sequence:

TTTCTATTGCAAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTAAT

U12 Branch Point Sequence:

ATTCTCCTAATA

Flanking Amino Acid:

KLTSALFHAASGWLGWKSKH

Intron Amino Acid Position:

343

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.3

0.74

76.8

33.4

Major BPS

81.9

0.79

0.9

80.1

Major PPT

67.7

0.4

1.2

68.3

41.6

Minor 5ss

31.6

-2.1

3.1

39.6

45.9

Minor BPS

59.9

0.31

1.6

71.79

33.7

Associated Gene:

Gene:

RAB3GAP2

Ensembl Gene ID:

ENSAPLG00000004958

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025180

20913761 - 20947594

33834

ENSAPLT00000005191

20913761 - 20958232

44472