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Intron Name: Anas_platyrhynchos_platyrhynchos_3_20936543_20937408_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20936543 - 20937408

Intron Length:

866

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATGTACC

5'SS Class:

strong_major

3'SS Sequence:

TTCTTCCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAAAAAA

U12 Branch Point Sequence:

ACTACCTAAACT

Flanking Amino Acid:

PFTGFFFALEGSSQPLLSHV

Intron Amino Acid Position:

317

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.8

80.6

31.9

Major BPS

53.6

0.09

59.9

32.5

Major PPT

90.4

0.91

0.6

88.7

20.7

Minor 5ss

43.1

-0.8

2.4

55.1

42.2

Minor BPS

65.2

0.56

1.7

79.06

42.9

Associated Gene:

Gene:

RAB3GAP2

Ensembl Gene ID:

ENSAPLG00000004958

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005191

20913761 - 20958232

44472

ENSAPLT00000025180

20913761 - 20947594

33834