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Intron Name: Anas_platyrhynchos_platyrhynchos_3_20937558_20938557_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20937558 - 20938557

Intron Length:

1000

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGCATT

5'SS Class:

strong_major

3'SS Sequence:

ATGTTTTTGTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTAAT

U12 Branch Point Sequence:

CTCACTTTAATG

Flanking Amino Acid:

VDTIVDHASIGIMTLCPFDQ

Intron Amino Acid Position:

267

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.3

0.83

0.9

83.5

Major BPS

87.2

0.92

0.9

87.6

25.6

Major PPT

72.9

0.52

Minor 5ss

45.5

-0.5

2.9

63.6

Minor BPS

61.2

0.21

1.5

59.21

43.5

Associated Gene:

Gene:

RAB3GAP2

Ensembl Gene ID:

ENSAPLG00000004958

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025180

20913761 - 20947594

33834

ENSAPLT00000005191

20913761 - 20958232

44472