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Intron Name: Anas_platyrhynchos_platyrhynchos_3_20940247_20940403_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20940247 - 20940403

Intron Length:

157

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATGTTTC

5'SS Class:

strong_major

3'SS Sequence:

CTTTCTCTTTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTCAC

U12 Branch Point Sequence:

ATATTGTTCACA

Flanking Amino Acid:

TSGYVRFYTESGVLLLAQLL

Intron Amino Acid Position:

167

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.6

0.93

0.8

Major BPS

74.9

0.62

1.1

77.4

37.4

Major PPT

86.3

0.82

0.6

85.1

22.4

Minor 5ss

53.1

0.1

2.3

69.7

41.2

Minor BPS

47.9

-0.1

2.4

65.86

40.7

Associated Gene:

Gene:

RAB3GAP2

Ensembl Gene ID:

ENSAPLG00000004958

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005191

20913761 - 20958232

44472

ENSAPLT00000025180

20913761 - 20947594

33834