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Intron Name: Anas_platyrhynchos_platyrhynchos_3_20940644_20942712_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20940644 - 20942712

Intron Length:

2069

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAGGTCTT

5'SS Class:

major

3'SS Sequence:

TTTCTGTTTCTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTTAT

U12 Branch Point Sequence:

TTTGTTTTATCT

Flanking Amino Acid:

GWSGSLNVEEGECVSSVLCI

Intron Amino Acid Position:

125

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.7

0.65

1.1

72.7

44.5

Major BPS

78.7

0.71

1.2

71.7

44.6

Major PPT

84.1

0.77

0.8

77.1

37.1

Minor 5ss

38.3

-1.3

3.4

46.3

Minor BPS

0.52

1.7

82.72

39.3

Associated Gene:

Gene:

RAB3GAP2

Ensembl Gene ID:

ENSAPLG00000004958

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005191

20913761 - 20958232

44472

ENSAPLT00000025180

20913761 - 20947594

33834