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Intron Name: Anas_platyrhynchos_platyrhynchos_3_20944649_20947489_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20944649 - 20947489

Intron Length:

2841

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTAAGTTCA

5'SS Class:

major

3'SS Sequence:

GCTTTACCTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAAAAAT

U12 Branch Point Sequence:

CATGCATTAACT

Flanking Amino Acid:

AWDEAELPEPEEEESASKNQ

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.1

0.59

1.1

35.3

Major BPS

62.8

0.32

1.1

67.9

34.4

Major PPT

73.3

0.52

0.8

67.1

34.3

Minor 5ss

43.4

-0.7

2.8

60.6

43.7

Minor BPS

64.1

0.52

1.8

78.35

43.6

Associated Gene:

Gene:

RAB3GAP2

Ensembl Gene ID:

ENSAPLG00000004958

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025180

20913761 - 20947594

33834

ENSAPLT00000005191

20913761 - 20958232

44472