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Intron Name: Anas_platyrhynchos_platyrhynchos_3_20947558_20958132_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20947558 - 20958132

Intron Length:

10575

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTGAGTGCG

5'SS Class:

strong_major

3'SS Sequence:

TTTTTGTCTAAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTCAT

U12 Branch Point Sequence:

TTTTGTCTAAAG

Flanking Amino Acid:

QRRHGGAAGGAGKPTNWEDG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.5

0.72

66.2

39.6

Major BPS

92.2

1.05

0.7

91.9

19.6

Major PPT

77.9

0.63

78.9

33.5

Minor 5ss

-2.5

33.4

41.6

Minor BPS

48.7

-0.2

2.2

65.15

42.7

Associated Gene:

Gene:

RAB3GAP2

Ensembl Gene ID:

ENSAPLG00000004958

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005191

20913761 - 20958232

44472