Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_21009482_21010421_R

Intron Information:

Intron Rank:

148652

Intron Class:

major

Intron Phase:

Intron Coordinates:

21009482 - 21010421

Intron Length:

940

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATTTTGT

5'SS Class:

major

3'SS Sequence:

GTTATTATTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTATTAT

U12 Branch Point Sequence:

TTATTATTACAG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.1

0.66

73.3

38.2

Major BPS

84.7

0.86

74.3

40.7

Major PPT

80.2

0.68

0.9

73.4

40.6

Minor 5ss

48.1

-0.2

2.5

67.9

42.9

Minor BPS

47.5

-0.3

58.39

42.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027426

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040213

21005843 - 21010553

4711

ENSAPLT00000019826

21005843 - 21010553

4711