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Intron Name: Anas_platyrhynchos_platyrhynchos_3_21050081_21053204_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21050081 - 21053204

Intron Length:

3124

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAAGTAAT

5'SS Class:

strong_major

3'SS Sequence:

TTTCTTTACTTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTGAA

U12 Branch Point Sequence:

ATTTCTTTACTT

Flanking Amino Acid:

LNPIKRGSLEQIMKDRWMNV

Intron Amino Acid Position:

304

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.6

0.91

0.8

89.8

22.2

Major BPS

79.4

0.73

0.9

69.6

37.5

Major PPT

80.6

0.69

0.8

81.5

29.3

Minor 5ss

39.1

-1.2

2.8

51.7

39.1

Minor BPS

71.4

0.75

1.5

85.82

34.8

Associated Gene:

Gene:

MARK1

Ensembl Gene ID:

ENSAPLG00000005705

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027596

21013554 - 21068564

55011

ENSAPLT00000005968

21013554 - 21068564

55011

ENSAPLT00000045016

21013554 - 21068564

55011