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Intron Name: Anas_platyrhynchos_platyrhynchos_3_21073746_21075501_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21073746 - 21075501

Intron Length:

1756

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGGCG

5'SS Class:

strong_major

3'SS Sequence:

CCTCTCCCTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCGCAC

U12 Branch Point Sequence:

GTTCCCGCACCT

Flanking Amino Acid:

YSKRLKKYGKNVGKALQKGC

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.5

0.79

0.9

66.5

39.1

Major BPS

44.1

-0.3

1.3

48.6

36.6

Major PPT

79.5

0.66

0.7

73.1

25.1

Minor 5ss

24.1

-3

3.2

29.4

43.5

Minor BPS

45.2

-0.2

2.4

70.65

45.7

Associated Gene:

Gene:

C1orf115

Ensembl Gene ID:

ENSAPLG00000002096

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002092

21073470 - 21075943

2474