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Intron Name: Anas_platyrhynchos_platyrhynchos_3_2110360_2123642_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2110360 - 2123642

Intron Length:

13283

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAGGTATA

5'SS Class:

strong_major

3'SS Sequence:

TTTATTTTGACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTAAT

U12 Branch Point Sequence:

TTTTCTTTATTT

Flanking Amino Acid:

MGEFFPIDDNEETEMSE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.1

0.92

0.9

87.1

Major BPS

91.8

1.04

0.7

90.2

19.3

Major PPT

82.6

0.73

37.5

Minor 5ss

37.9

-1.4

3.1

50.4

46.1

Minor BPS

76.2

0.9

1.4

91.47

32.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012517

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013047

1909148 - 2191866

282719