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Intron Name: Anas_platyrhynchos_platyrhynchos_3_21262849_21268523_R

Intron Information:

Intron Rank:

150529

Intron Class:

major

Intron Phase:

Intron Coordinates:

21262849 - 21268523

Intron Length:

5675

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTACAGTGC

5'SS Class:

major

3'SS Sequence:

GTCTCCTGGACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTGT

U12 Branch Point Sequence:

GTCTCCTGGACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

60.3

0.24

1.1

49.6

42.2

Major BPS

38.1

-0.7

4.3

71.7

44.6

Major PPT

64.4

0.32

1.1

60.4

40.4

Minor 5ss

35.8

-1.6

3.6

49.2

47.4

Minor BPS

65.9

0.49

1.5

72.22

39.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028466

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027103

21262196 - 21268714

6519