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Intron Name: Anas_platyrhynchos_platyrhynchos_3_21276618_21279348_R

Intron Information:

Intron Rank:

150532

Intron Class:

major

Intron Phase:

Intron Coordinates:

21276618 - 21279348

Intron Length:

2731

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGACCT

5'SS Class:

strong_major

3'SS Sequence:

CATTCCCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTCCAT

U12 Branch Point Sequence:

AAAGGTTGAACT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.4

0.95

0.8

78.1

36.3

Major BPS

77.3

0.68

1.2

86.7

32.3

Major PPT

81.3

0.7

0.8

77.6

30.8

Minor 5ss

34.6

-1.8

3.2

49.1

46.6

Minor BPS

46.3

-0.2

1.9

61.19

42.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028466

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034105

21239933 - 21279551

39619