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Intron Name: Anas_platyrhynchos_platyrhynchos_3_213217_217640_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

213217 - 217640

Intron Length:

4424

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGATGC

5'SS Class:

strong_major

3'SS Sequence:

GTTATTTTTATAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TCATTTTTAATT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.1

0.95

0.8

75.9

34.8

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

81.8

0.71

0.8

76.6

37.5

Minor 5ss

38.3

-1.3

3.1

50.9

45.7

Minor BPS

72.8

0.79

1.1

79.64

37.1

Associated Gene:

Gene:

SLX4IP

Ensembl Gene ID:

ENSAPLG00000009267

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009639

213038 - 288185

75148

ENSAPLT00000036500

213038 - 289630

76593