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Intron Name: Anas_platyrhynchos_platyrhynchos_3_21396804_21399564_R


Intron Information:

Intron Rank:
2

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
21396804 - 21399564

Intron Length:
2761

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
TTG|GTAATTATC

5'SS Class:
strong_major

3'SS Sequence:
TTCTCATTTGCAG|A

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TTCTCAT

U12 Branch Point Sequence:
TTTTTCTCATTT

Flanking Amino Acid:
QYFEEAFEFIEEAHQCGKGL

Intron Amino Acid Position:
392

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
80.4
0.72
1
79.9
33.1

Major BPS
94.9
1.12
0.6
93.9
14.7

Major PPT
86.1
0.81
0.7
80.9
29.8

Minor 5ss
40.5
-1.1
2.8
51.8
39.1

Minor BPS
62.3
0.47
1.8
83.64
37.8

Associated Gene:

Gene:
DUSP10

Ensembl Gene ID:

Chromosome:
3

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

21395177 - 21419897
24721