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Intron Name: Anas_platyrhynchos_platyrhynchos_3_2157598_2158239_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2157598 - 2158239

Intron Length:

642

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAGTTT

5'SS Class:

strong_major

3'SS Sequence:

GTTGTGCTAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAA

U12 Branch Point Sequence:

TCATTTTCAATC

Flanking Amino Acid:

PMGCKQDQAEGQQDGAAEEE

Intron Amino Acid Position:

117

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.5

0.79

0.9

81.9

32.1

Major BPS

90.8

1.01

0.7

91.9

19.6

Major PPT

68.7

0.42

1.1

62.3

43.3

Minor 5ss

-0.9

3.5

64.1

47.4

Minor BPS

56.2

0.17

1.5

62.42

37.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012517

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013047

1909148 - 2191866

282719