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Intron Name: Anas_platyrhynchos_platyrhynchos_3_21654985_21659134_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21654985 - 21659134

Intron Length:

4150

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTAGTAAT

5'SS Class:

strong_major

3'SS Sequence:

TTTGTTTTTCAAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTCAG

U12 Branch Point Sequence:

TTGTTTTTCAAG

Flanking Amino Acid:

GSLYKIVDPARRAPPGKCKY

Intron Amino Acid Position:

543

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.5

0.86

88.2

26.7

Major BPS

0.52

1.5

79.6

35.6

Major PPT

80.1

0.68

79.2

38.4

Minor 5ss

33.8

-1.9

2.6

42.8

44.1

Minor BPS

-0.2

1.9

59.4

Associated Gene:

Gene:

HHIPL2

Ensembl Gene ID:

ENSAPLG00000006071

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006302

21653662 - 21668660

14999