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Intron Name: Anas_platyrhynchos_platyrhynchos_3_21664322_21668516_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21664322 - 21668516

Intron Length:

4195

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACCGGGA

5'SS Class:

major

3'SS Sequence:

TTTAACTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATCTGAT

U12 Branch Point Sequence:

ATTTCTTTAACT

Flanking Amino Acid:

PAERQQHCSKECSPYAAHLY

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

65.2

0.36

1.3

55.1

44.1

Major BPS

82.5

0.81

0.8

71.4

36.6

Major PPT

82.8

0.74

0.9

73.7

41.3

Minor 5ss

33.1

-1.9

3.7

47.2

48.2

Minor BPS

90.2

1.34

0.8

98.4

23.8

Associated Gene:

Gene:

HHIPL2

Ensembl Gene ID:

ENSAPLG00000006071

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006302

21653662 - 21668660

14999