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Intron Name: Anas_platyrhynchos_platyrhynchos_3_21679791_21680591_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21679791 - 21680591

Intron Length:

801

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTCCT

5'SS Class:

strong_major

3'SS Sequence:

CCTGTTTTCCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGTTAAT

U12 Branch Point Sequence:

GCAAAGTTAATT

Flanking Amino Acid:

SKQKNTLLEYEKEGLEDSSV

Intron Amino Acid Position:

190

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.5

0.88

0.9

77.1

37.8

Major BPS

75.6

0.64

1.1

75.7

36.5

Major PPT

75.5

0.57

0.8

68.5

37.3

Minor 5ss

-1.5

48.7

41.1

Minor BPS

45.1

-0.2

2.2

59.31

43.8

Associated Gene:

Gene:

TAF1A

Ensembl Gene ID:

ENSAPLG00000006303

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006540

21673087 - 21684217

11131